{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":140590861,"defaultBranch":"master","name":"smrnaseq","ownerLogin":"nf-core","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-07-11T14:56:59.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/35520196?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726220038.0","currentOid":""},"activityList":{"items":[{"before":"61b3738a10d35d4e2144c06d97fe0c54e5f451ac","after":"395f8011670542fdcc396cc88942f4c51f4965b5","ref":"refs/heads/dev","pushedAt":"2024-09-19T22:36:03.000Z","pushType":"pr_merge","commitsCount":9,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #432 from atrigila/upgrade_multiqc","shortMessageHtmlLink":"Merge pull request #432 from atrigila/upgrade_multiqc"}},{"before":"1e29e16c7f6a893cb897276e1374269899f1ac09","after":"61b3738a10d35d4e2144c06d97fe0c54e5f451ac","ref":"refs/heads/dev","pushedAt":"2024-09-18T08:35:28.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #430 from atrigila/pe_warning\n\nEmit a warning upon supply of PE data","shortMessageHtmlLink":"Merge pull request #430 from atrigila/pe_warning"}},{"before":"ef77e5cc9891a514b6032a2c2f2dcda2725a0e01","after":"1e29e16c7f6a893cb897276e1374269899f1ac09","ref":"refs/heads/dev","pushedAt":"2024-09-17T18:04:09.000Z","pushType":"pr_merge","commitsCount":12,"pusher":{"login":"atrigila","name":"Anabella Trigila","path":"/atrigila","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18577080?s=80&v=4"},"commit":{"message":"Merge pull request #427 from atrigila/add_pigz\n\nAdd nf-core `pigz uncompress`","shortMessageHtmlLink":"Merge pull request #427 from atrigila/add_pigz"}},{"before":"7e8c66e3eb751e3acc0c7f1bcdfc1d7bd71228ad","after":"ef77e5cc9891a514b6032a2c2f2dcda2725a0e01","ref":"refs/heads/dev","pushedAt":"2024-09-17T15:00:07.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"atrigila","name":"Anabella Trigila","path":"/atrigila","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18577080?s=80&v=4"},"commit":{"message":"Merge pull request #429 from atrigila/save_intermediates\n\nallow to save intermediates","shortMessageHtmlLink":"Merge pull request #429 from atrigila/save_intermediates"}},{"before":"57c5bf9d323b6de6dd7231c8700a5ac16122fd45","after":"7e8c66e3eb751e3acc0c7f1bcdfc1d7bd71228ad","ref":"refs/heads/dev","pushedAt":"2024-09-16T14:46:24.000Z","pushType":"pr_merge","commitsCount":13,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #426 from atrigila/add_nf_core_mirtop\n\nAdd nf-core `mirtop`","shortMessageHtmlLink":"Merge pull request #426 from atrigila/add_nf_core_mirtop"}},{"before":"47ae1592f4467342afe93560d58e9d6991adffb2","after":"57c5bf9d323b6de6dd7231c8700a5ac16122fd45","ref":"refs/heads/dev","pushedAt":"2024-09-13T10:27:22.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #425 from nf-core/bump-minimum-nxf-version","shortMessageHtmlLink":"Merge pull request #425 from nf-core/bump-minimum-nxf-version"}},{"before":"dcb5450311f37b5cf794c442ecdc9cae03e70582","after":"9a740bc1adff2998aa4445d47dadf3282e0d3313","ref":"refs/heads/bump-minimum-nxf-version","pushedAt":"2024-09-13T09:44:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Fix version to 23.10","shortMessageHtmlLink":"Fix version to 23.10"}},{"before":"bc37dc2a908f9d60d0e2ec2435e59c72da5622ed","after":"dcb5450311f37b5cf794c442ecdc9cae03e70582","ref":"refs/heads/bump-minimum-nxf-version","pushedAt":"2024-09-13T09:41:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Fix litn","shortMessageHtmlLink":"Fix litn"}},{"before":null,"after":"bc37dc2a908f9d60d0e2ec2435e59c72da5622ed","ref":"refs/heads/bump-minimum-nxf-version","pushedAt":"2024-09-13T09:33:58.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Bump versions","shortMessageHtmlLink":"Bump versions"}},{"before":"8fa10180a1063cc3f8387e5a8f84407085e17b96","after":"47ae1592f4467342afe93560d58e9d6991adffb2","ref":"refs/heads/dev","pushedAt":"2024-09-12T07:08:45.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #418 from atrigila/add_nf_core_seqclustre\n\nAdd nf-core `seqcluster` module","shortMessageHtmlLink":"Merge pull request #418 from atrigila/add_nf_core_seqclustre"}},{"before":"3c076a890c73aa5ac08d7129e10bda2ee56659ef","after":"8fa10180a1063cc3f8387e5a8f84407085e17b96","ref":"refs/heads/dev","pushedAt":"2024-09-11T19:24:24.000Z","pushType":"pr_merge","commitsCount":9,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #420 from atrigila/fix_testnextflex\n\nAdd `config` mode to nf-core `mirtrace/qc`","shortMessageHtmlLink":"Merge pull request #420 from atrigila/fix_testnextflex"}},{"before":"f7cd5babd5b70aac667a5391a4acec010fc36711","after":"3c076a890c73aa5ac08d7129e10bda2ee56659ef","ref":"refs/heads/dev","pushedAt":"2024-09-07T06:53:45.000Z","pushType":"pr_merge","commitsCount":5,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #411 from atrigila/mirtrace_migration","shortMessageHtmlLink":"Merge pull request #411 from atrigila/mirtrace_migration"}},{"before":"874ef646adb9f93ebf000788e1f48225a0efff2f","after":"f7cd5babd5b70aac667a5391a4acec010fc36711","ref":"refs/heads/dev","pushedAt":"2024-09-07T06:52:49.000Z","pushType":"pr_merge","commitsCount":15,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #386 from nf-core/trim3p_nextflex","shortMessageHtmlLink":"Merge pull request #386 from nf-core/trim3p_nextflex"}},{"before":"046757e19c29da65f23d3576c494ec68501a2eaa","after":"7a15447ce885e4ac91274a9966508d61aef742b5","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-09-06T21:17:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"atrigila","name":"Anabella Trigila","path":"/atrigila","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18577080?s=80&v=4"},"commit":{"message":"update ci tests nextflex","shortMessageHtmlLink":"update ci tests nextflex"}},{"before":"1a8a68efad9064592e525331ef7a2fbbbeda80e5","after":"046757e19c29da65f23d3576c494ec68501a2eaa","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-09-06T20:42:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Update main.nf","shortMessageHtmlLink":"Update main.nf"}},{"before":"bc228d32fcccc19dd5ae410032949e476778cb06","after":"1a8a68efad9064592e525331ef7a2fbbbeda80e5","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-09-06T14:38:25.000Z","pushType":"pr_merge","commitsCount":102,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Merge pull request #412 from nschcolnicov/nextflex\n\nUpdating nextflex branch","shortMessageHtmlLink":"Merge pull request #412 from nschcolnicov/nextflex"}},{"before":"8a64f1968baa1b37c36c5b5d4e01e1f4a7781f30","after":"874ef646adb9f93ebf000788e1f48225a0efff2f","ref":"refs/heads/dev","pushedAt":"2024-09-04T20:20:20.000Z","pushType":"pr_merge","commitsCount":27,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #397 from atrigila/nf_core_blat\n\nReplace local `blat` for nf-core `blat` in contaminant filter subworkflow","shortMessageHtmlLink":"Merge pull request #397 from atrigila/nf_core_blat"}},{"before":"5cb7ff8dba2d1150babb4bf4afa6866c1234c80a","after":null,"ref":"refs/heads/fix-404","pushedAt":"2024-09-04T14:48:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"}},{"before":"ba8679150cfaacb0db8512659104f13f3e8d9748","after":"8a64f1968baa1b37c36c5b5d4e01e1f4a7781f30","ref":"refs/heads/dev","pushedAt":"2024-09-04T14:48:33.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #405 from nf-core/fix-404\n\nFix Umicollapse PE wrong method set","shortMessageHtmlLink":"Merge pull request #405 from nf-core/fix-404"}},{"before":"901f7b0a61916c5c279f9ded39967897a15ffa32","after":"5cb7ff8dba2d1150babb4bf4afa6866c1234c80a","ref":"refs/heads/fix-404","pushedAt":"2024-09-04T13:15:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Add Fix for 404","shortMessageHtmlLink":"Add Fix for 404"}},{"before":null,"after":"901f7b0a61916c5c279f9ded39967897a15ffa32","ref":"refs/heads/fix-404","pushedAt":"2024-09-04T13:12:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Fix https://github.com/nf-core/smrnaseq/issues/404\n\nFix for https://github.com/nf-core/smrnaseq/issues/404","shortMessageHtmlLink":"Fix #404"}},{"before":"63da64cc3c254419c19fe5d106abfb5d18a5231a","after":"ba8679150cfaacb0db8512659104f13f3e8d9748","ref":"refs/heads/dev","pushedAt":"2024-09-03T14:14:56.000Z","pushType":"pr_merge","commitsCount":13,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Merge pull request #398 from nschcolnicov/input_channel_fixing\n\nUpdated channels","shortMessageHtmlLink":"Merge pull request #398 from nschcolnicov/input_channel_fixing"}},{"before":"6c22349c7a09a6959072234f39a73037865556a3","after":"bc228d32fcccc19dd5ae410032949e476778cb06","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-08-29T16:18:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lpantano","name":"Lorena Pantano","path":"/lpantano","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1621788?s=80&v=4"},"commit":{"message":"add changelog","shortMessageHtmlLink":"add changelog"}},{"before":"79447ee878568d7df31b118db1cd3136f50be00e","after":"6c22349c7a09a6959072234f39a73037865556a3","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-08-29T16:14:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lpantano","name":"Lorena Pantano","path":"/lpantano","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1621788?s=80&v=4"},"commit":{"message":"fix step name to match module.config","shortMessageHtmlLink":"fix step name to match module.config"}},{"before":"0c5222a55e531282a74b50a48c2882d1092a18a1","after":"79447ee878568d7df31b118db1cd3136f50be00e","ref":"refs/heads/trim3p_nextflex","pushedAt":"2024-08-29T14:49:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lpantano","name":"Lorena Pantano","path":"/lpantano","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1621788?s=80&v=4"},"commit":{"message":"add nextflex file","shortMessageHtmlLink":"add nextflex file"}},{"before":"228212c26df7771bab675027b4941a5916fbe80b","after":"63da64cc3c254419c19fe5d106abfb5d18a5231a","ref":"refs/heads/dev","pushedAt":"2024-08-28T18:41:39.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Merge pull request #394 from nschcolnicov/reducing_tests\n\nUpdate test files","shortMessageHtmlLink":"Merge pull request #394 from nschcolnicov/reducing_tests"}},{"before":"17c027e2a8c5ea89db71efac5fb69ba6f2c0ca9b","after":"228212c26df7771bab675027b4941a5916fbe80b","ref":"refs/heads/dev","pushedAt":"2024-08-28T17:10:24.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Merge pull request #388 from nschcolnicov/fix_igenome\n\nUpdating workflow files to work with Igenome","shortMessageHtmlLink":"Merge pull request #388 from nschcolnicov/fix_igenome"}},{"before":"0e95690513053e1e83d0074ab338870bd2141b5d","after":"17c027e2a8c5ea89db71efac5fb69ba6f2c0ca9b","ref":"refs/heads/dev","pushedAt":"2024-08-27T17:34:47.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"atrigila","name":"Anabella Trigila","path":"/atrigila","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18577080?s=80&v=4"},"commit":{"message":"Merge pull request #391 from atrigila/samtools_index_c\n\nChange `.bai` index for `.csi` index in `samtools_index`","shortMessageHtmlLink":"Merge pull request #391 from atrigila/samtools_index_c"}},{"before":"0a39d56e7916b718faab0e2b69b48974ca6e5dec","after":"0e95690513053e1e83d0074ab338870bd2141b5d","ref":"refs/heads/dev","pushedAt":"2024-08-27T11:42:59.000Z","pushType":"pr_merge","commitsCount":7,"pusher":{"login":"apeltzer","name":"Alexander Peltzer","path":"/apeltzer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/2359510?s=80&v=4"},"commit":{"message":"Merge pull request #387 from atrigila/nf_tests_blat","shortMessageHtmlLink":"Merge pull request #387 from atrigila/nf_tests_blat"}},{"before":"ae06cf8573847bf3ad3f577d60e65c9c88bd71fd","after":"0a39d56e7916b718faab0e2b69b48974ca6e5dec","ref":"refs/heads/dev","pushedAt":"2024-08-26T16:17:31.000Z","pushType":"pr_merge","commitsCount":21,"pusher":{"login":"nschcolnicov","name":"Nicolás Schcolnicov","path":"/nschcolnicov","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/90359308?s=80&v=4"},"commit":{"message":"Merge pull request #381 from nschcolnicov/add_ci_nftests\n\nAdd ci nftests","shortMessageHtmlLink":"Merge pull request #381 from nschcolnicov/add_ci_nftests"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEu2A5TQA","startCursor":null,"endCursor":null}},"title":"Activity · nf-core/smrnaseq"}