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298 Open 7,590 Closed
298 Open 7,590 Closed
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Issues list

fovs are not captured by ImageDimPlot function
#9321 opened Sep 19, 2024 by elifozcelik
Higher resolution .tif images for SpatialDimPlot enhancement New feature or request
#9319 opened Sep 17, 2024 by MustafaElshani
how to integrate multiple HD Visium data
#9318 opened Sep 17, 2024 by JuanXie19
1
Warning message: In size + sum(size_args, na.rm = FALSE) : NAs produced by integer overflow
#9316 opened Sep 16, 2024 by Sirin24
Analyze more than 20 samples in Seurat R package
#9315 opened Sep 14, 2024 by Motoufiq
Ch. 7 clustering methods
#9313 opened Sep 13, 2024 by tud03125
Clarification on Directed vs. Undirected SNN Graph in Seurat Clustering
#9312 opened Sep 13, 2024 by tim-meese
CCAIntegration results differ with IntegrateLayers() (V5) and IntegrateData() (V4)
#9310 opened Sep 13, 2024 by mauritsunkel
ImageDimPlot seems confusing and unfriendly to programmers bug Something isn't working
#9309 opened Sep 13, 2024 by Puriney
2
Excess singletons identified from 2.4M cells
#9308 opened Sep 12, 2024 by Enterprise-D
MapQuery error in Seurat reference mapping
#9306 opened Sep 12, 2024 by howardhkk123
Spatial Transcriptomics Analysis -10x visium
#9305 opened Sep 11, 2024 by ankita86
Error (vector::reserve) with SCTransform on Large Seurat v5 Object bug Something isn't working
#9304 opened Sep 11, 2024 by mztalay
Issue with RunBanksy and SpatialDimPlot
#9303 opened Sep 11, 2024 by tingchiafelix
Issue with genome annotations while running Multiome (ATACseq + RNAseq) analysis
#9302 opened Sep 11, 2024 by ADvorkinGheva
Issue with using sketch assay after loading single cell/single nuc data with BPcells from h5ad file
#9301 opened Sep 11, 2024 by fingeram
1
issue with using sketch assay after BPcells (seurat v5) bug Something isn't working
#9300 opened Sep 11, 2024 by fingeram
1
Error in collect() Aug 20 Analyzing PBMC scATAC-seq tutorial bug Something isn't working
#9299 opened Sep 10, 2024 by SaharBJ
merging Seurat objects mapped to hg19 and hg38
#9298 opened Sep 10, 2024 by shaghayeghsoudi
Read10X_Image Not Loading CSV File bug Something isn't working
#9297 opened Sep 9, 2024 by Ezoorp
about the results of DotPlot
#9295 opened Sep 9, 2024 by liuyu988
CosMx Nanostring dataset ImageDimPlot, plot cluster spatial distibution for every FOV seperatly
#9279 opened Sep 2, 2024 by Mohamed-Moustafa-tech
1
scTransform Causes Substantial Y Chromosome Gene Abundances in Women Samples bug Something isn't working
#9277 opened Sep 2, 2024 by DarioS
Error: objects ‘winProgressBar’, ‘getWinProgressBar’, ‘setWinProgressBar’ are not exported by 'namespace:utils'
#9276 opened Sep 2, 2024 by shijianlvxing-lab
1
why is RNA assay empty after SCT transform v2 and IntegrateLayers() [SeuratV5]
#9275 opened Sep 1, 2024 by klai001
6
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