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Pipeline requires 72GB of RAM, even to test.
bug
Something isn't working
#408
opened Jul 26, 2024 by
mpiersonsmela
samplesheet handling: different path + same filename gives an error
bug
Something isn't working
#407
opened Jun 28, 2024 by
AdrijaK
Adding --maxVariantFrac and --minOppositeDepth to MethylDackel (Bwameth option)
enhancement
New feature or request
#404
opened Jun 18, 2024 by
LucaZanella15
Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency
enhancement
New feature or request
#394
opened Apr 1, 2024 by
pdemko
--rrbs and --emseq parameter and argument usage
enhancement
New feature or request
#389
opened Mar 20, 2024 by
deep-buddingcoder
CG CHG and CHH with --comprehensive flag using bismark workflow
enhancement
New feature or request
#388
opened Mar 13, 2024 by
MMJBerger
samplesheet input is not detecting entire values in sample column
bug
Something isn't working
#378
opened Feb 9, 2024 by
wvictor14
Support for NuGEN Ovation RRBS
enhancement
New feature or request
#376
opened Jan 19, 2024 by
jma1991
Add CX report support from bismark_methylation_extractor
enhancement
New feature or request
good first issue
Good for newcomers
#372
opened Jan 9, 2024 by
Tintest
--skip_qualimap parameter to disable qualimap
enhancement
New feature or request
#367
opened Jan 3, 2024 by
adamrtalbot
Pipeline unable to recognise samples processed across multiple lanes
bug
Something isn't working
#351
opened Oct 22, 2023 by
jma1991
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